RetrogeneDB ID:
retro_opri_220
Organism:
Location:
GeneScaffold_3736:400048-400210 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
83.64 %
Coverage:
52.38 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
TXN
Parental gene aliases:
No gene alias available
Parental gene description:
thioredoxin [Source:HGNC Symbol;Acc:12435]

Genomic region (view in browser)





>retro_opri_220
AGCATGCTGTTTCTTGAAGTAGATGTGGACGACTGCCAGGATATCTCTGCAGACTGTGAA
ATCAAATGCATGCCAAACTTCCAGTTTTTTAAGGGTCAGAAGGTGGGTGAATTTTCCAGA
GCAAATAAGGAAAAACTTGAAACCACCATTAATGAACTACTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NVLFIEVDVDDCQDIAADCEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINELL
..LF.EVDVDDCQDI.ADCE.KCMP.FQFF.KGQKVGEFS.ANKEKLE.TINELL
Retrocopy
SMLFLEVDVDDCQDISADCEIKCMPNFQFF-KGQKVGEFSRANKEKLETTINELL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide