RetrogeneDB ID:
retro_opri_229
Organism:
Location:
GeneScaffold_3847:265126-265396 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.78 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
NUTF2
Parental gene aliases:
No gene alias available
Parental gene description:
nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722]

Genomic region (view in browser)





>retro_opri_229
ATGGGAGACAAGCCAATTTGGGAGCGGATTGGATCCAGCTTCATTCAACATTACTACCAG
TTATTTGATAATGACAGAACCCAGCTAGGCGCCATTTACGTTGATGCATCATGCCTTACA
TGGGAAGGACAGCAGTTCCAAGGGAAAGCTGCCATTGTGGAGAAGTTATCTAGCCTTCCC
TTCCAAAAAATCCAGCACAGCATCACGGCACAGGATCATCAGCCCACGCCAGATAGCTGC
ATCATTAGCATGGTTGTGGGCCAGCTCAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLK
MGDKPIWE.IGSSFIQHYYQLFDNDRTQLGAIY.DASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLK
Retrocopy
MGDKPIWERIGSSFIQHYYQLFDNDRTQLGAIYVDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide