RetrogeneDB ID:
retro_opri_31
Organism:
Location:
GeneScaffold_1123:217469-217688 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
56.58 %
Coverage:
57.14 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
COX20
Parental gene aliases:
No gene alias available
Parental gene description:
COX20 cytochrome C oxidase assembly factor [Source:HGNC Symbol;Acc:26970]

Genomic region (view in browser)





>retro_opri_31
AAACCCTTAAAGTTCCTAGGAAGTTTAGGTGCTGGAAACATTCCCTGTGAGGATTCAACA
TGCAATGGTTCATTAGCAGTTGTTGAGGCTGGCCTTGGACACTTCTTGTTTTCTAGTAGA
AGATCATGTGATGTTGGAATAGGGGGATTTATCTTGGTGTTTTCAGGATGCAGTTTCCAC
CATAAGTGTAATCACACAAAGCAAATGATCTGGGCTCGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KTFKLLGILDVENTPCARDSILYGSLGSAVSGLGHFLFTSRIRRSCDVGVGGFILVTLGCWFHCRYNYAKQRIQER
K..K.LG.L...N.PC..DS...GSL.....GLGHFLF.S..RRSCDVG.GGFILV..GC.FH...N..KQ.I..R
Retrocopy
KPLKFLGSLGAGNIPC-EDSTCNGSLAVVEAGLGHFLFSS--RRSCDVGIGGFILVFSGCSFHHKCNHTKQMIWAR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide