RetrogeneDB ID:
retro_opri_386
Organism:
Location:
scaffold_1052:229820-230522 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
84.62 %
Coverage:
95.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
MOB1B
Parental gene aliases:
No gene alias available
Parental gene description:
MOB kinase activator 1B [Source:HGNC Symbol;Acc:29801]

Genomic region (view in browser)





>retro_opri_386
CCTCCGAGTCCTGAGCAGGGCAGGGGCTGGCGGCCCTCCGTCTCTTCCGCCAAGATGAGC
TTCCTCTTCAGCAGCCATTCTTCTAAAACATTCAAACCAAAGAAGAATATCCCAGAAGGG
TCCCATCAGTATGAGCTCCTGAAGCATGTGGAAGCGACTCTAGAAAGAGGGAATCTGAGA
CAAGCCGTTATGTTGCCAGAGGGAGAGGACCTCAATGAGTGGATTGCTGTTAACACTGTG
GACTTCTTCAACCAGATCAACATGCTATATGGAACTATTACAGAATTCTGCACTGAAGCA
AGCTGTCTAGTCATGTCTGCTGGGCCAAGATATGAATATCACTGGGCAAATGATACTGAT
ATTAAAAAGCCAATCAAATGTTCTGCACCAAAGTACATTGACTATCTGATGACTTGGGTT
CAGGATCAGTTTGATGATGAAACTCTTTTTCCTTCTAAGATTGGTGTCCCATTTCCCAAA
AATTTTATGTCTGTGGCAAAGACCATCCTGAAGTGCCTGTTCAGGGTTTATGCCCATATG
TATCACCAGCTCTTTGATTCCATGATGCAGCTCCAAGAGGAGGTCCATCTCAACACCTCC
TTTAAGCACTTTATTTTCTTTGTTCAGGAGTTTAACCTGATTGATAGGCGTGAGTTGGCA
CCTCTTCAGGAATTAATTGAGAAGCTTGGATCAAAAGACAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PVLPRPPPGPAPAHAAADMSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVNTVDFFNQINMLYGTITDFCTEE
P..P....G..P....A.MSFLF.S.SSKTFKPKKNIPEGSHQYELLKH.EATL..GNLR.AVMLPEGEDLNEW.AVNTVDFFNQINMLYGTIT.FCTE.
Retrocopy
PPSPEQGRGWRPSVSSAKMSFLFSSHSSKTFKPKKNIPEGSHQYELLKHVEATLERGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTEA


Parental protein
SCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTS
SC.VMSAGP.YEYHWA..T.IKKPIKCSAPKYIDYLMTWVQDQ.DDETLFPSKIGVPFPKNFMSVAKTILK.LFRVYAH.YHQ.FD...QLQEE.HLNTS
Retrocopy
SCLVMSAGPRYEYHWANDTDIKKPIKCSAPKYIDYLMTWVQDQFDDETLFPSKIGVPFPKNFMSVAKTILKCLFRVYAHMYHQLFDSMMQLQEEVHLNTS


Parental protein
FKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
FKHFIFFVQEFNLIDRRELAPLQELIEKL.SKDR
Retrocopy
FKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide