RetrogeneDB ID:
retro_opri_447
Organism:
Location:
scaffold_123:598082-598319 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.35 %
Coverage:
56.83 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
UBE2D3
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2D 3 [Source:HGNC Symbol;Acc:12476]

Genomic region (view in browser)





>retro_opri_447
GACCTTAGTGACTTGGCCCATGATGCTGTAGCATATGATACTCGGCAGTTCTACTTGGAC
GAGACATTTCACCGGCAAGCCACAGTTATGGGACTTAATGACAGCCCATATCAAGCCGGC
TTATTCCTTTTGACGATTCATTTTCATACAGACTACCCCTTCAAATCACCTAAGGTTGCA
TTTACAACAAGAATTTATCATGCAAATATGAACAGTAATGGTAGCATTTGTCTCAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD
.LSDLA.D..A........D..FH.QAT.MG.NDSPYQ.G.F.LTIHF.TDYPFK.PKVAFTTRIYH.N.NSNGSICL.
Retrocopy
DLSDLAHDAVAYDTRQFYLDETFHRQATVMGLNDSPYQAGLFLLTIHFHTDYPFKSPKVAFTTRIYHANMNSNGSICLN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide