RetrogeneDB ID:
retro_opri_486
Organism:
Pika ( Ochotona_princeps )
Location:
scaffold_13680:189-738 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
65.57 %
Coverage:
78.02 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
CAPNS1
Parental gene aliases:
No gene alias available
Parental gene description:
calpain, small subunit 1 [Source:HGNC Symbol;Acc:1481]
Genomic region (view in browser)
>retro_opri_486
CGGATAGTCGGAGGGATTGTGAATTTTATCAGTGAAGCTGCAGCAGCTCAGTATACTCCA
GAACCACCTCCCCCTCAGAAGCACTTCACCCATGTGGAGGCCCATGAAAGCGAAGAAGAG
AGGCGATTTCGGCGACAGTTTGAGCAACTGGCCGGTCCAGACCTGGAGGTGGGTGCCACC
GACCTGATGAATATTCTCAACAAAGTCATCTCTAAACACAAGGAGACCCTGAAGACAGAC
AGCTTCAGCCTTGACACGTGCCGGAGCATTGTGTCTGTCATGGACAGTGACACGAACGGG
AAGCTGGGCTTTGAAGAATTCAAGTACCTGTGGAACAACATTAAGAAGTGGCAGTGTGTG
TATAAGCAGTACGACAAGGATAGCTCTGGGTGTCTGCGTGGTTCCCAGCTGCGGCAGGCT
GTGCAGGCAGCAGGCTTCCAGCTGAACGAGCAGATCCACGAAATGATCGTGCGCCGCTAC
ACTGATGAGGATGGCAGTATGGATTTTAACAACTTCATCAGCTGCCTTGTCCGCCTGGAC
GGCATGTTT
Parental protein coverage
Changes in the retrocopy sequence
