RetrogeneDB ID:
retro_opri_567
Organism:
Location:
scaffold_1754:149973-150252 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.77 %
Coverage:
67.39 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
LAMTOR5
Parental gene aliases:
No gene alias available
Parental gene description:
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Genomic region (view in browser)





>retro_opri_567
GAGGGGATAGAGGCGACCTTGGAGCAGCACCTGGAGGACACAATGAAGAATCCATCCATT
GTCGGAGTCCTGTGCACAGACTCACAAGGACTTAATCTGGGCTGCCGTGGGACGCTGTCA
GATGAGCATACTGGAGTGATATCTGTTCTAGCCCAGCAAGCAGCTAAGCTTACCTCTGAC
CCCACAGACATTCCTGTGGTGTGTCTAGAATCAGATAACGGGAACATTATGATCCAGAAA
CATGATGGCATTGCAGTGGCAGTGCACAAAATGGCCTCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EGMEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS
EG.EATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEH.GVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGI.VAVHKMAS
Retrocopy
EGIEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEHTGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGIAVAVHKMAS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide