RetrogeneDB ID:
retro_opri_587
Organism:
Location:
scaffold_18322:5284-5482 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.04 %
Coverage:
66.34 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
MRPS36
Parental gene aliases:
No gene alias available
Parental gene description:
mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:16631]

Genomic region (view in browser)





>retro_opri_587
GTGATGGGCAGCAAGATGGCGTCTGCCAGCAGGGTCGTTCAGGTAGTCAAGCCACATACC
CCATTAATAAGGTTTCCCGACCGAAGAGATAATCCTAAGCCCAATGTGCCAGAAGCTTCG
AGAGCCACAGGCCTGCCTCACTCCTCTACACAGCACGCCACGGGGAGAAGGTCACCAGGC
TTGTTGATGTACCAGGGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MMGSKMASASRVVQVVKPHTPLIRFPDRRDNPKPNVSEASRATGLPAHSSAQHAMGSRSPGLLMYQG
.MGSKMASASRVVQVVKPHTPLIRFPDRRDNPKPNV.EASRATGLP.HSS.QHA.G.RSPGLLMYQG
Retrocopy
VMGSKMASASRVVQVVKPHTPLIRFPDRRDNPKPNVPEASRATGLP-HSSTQHATGRRSPGLLMYQG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide