RetrogeneDB ID:
retro_opri_6
Organism:
Pika ( Ochotona_princeps )
Location:
scaffold_635:71566-73723 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
Alignment summary
Identity:
54.14 %
Coverage:
79.76 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
SLC5A1
Parental gene aliases:
No gene alias available
Parental gene description:
solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:HGNC Symbol;Acc:11036]
Genomic region (view in browser)
>retro_opri_6
ATGAGGGCTGTACTGGAGACAGCAGACATTGCCATAGTGGCCCTGTATTTTATCCTGGTC
ATGTGCATTGGGTTTTTTGCCATGTGGAAATCTAATAGAAGCACCGTAAGTGGATACTTC
CTGGCGGGGCGCTCTATGACCTGGGTAGCCATTGGTGCCTCTCTGTTTGTGAGCAATATT
GGGAGTGAGCACTTCATTGGGCTGGCAGGATCTGGAGCGGCAAGCGGATTCGCAGTGGGT
GCTTGGGAGTTCAATGCCTTACTGCTTTTGCAACTTTTGGGATGGGTTTTCATCCCAATT
TACATCCGGTCGGGGGTATACACCATGCCTGAATACTTGTCCAAGCGATTCGGTGGCCAT
AGGATTCAGGTCTACTTTGCAGCCTTGTCTCTGATTCTCTATATCTTCACCAAGCTCTCA
GTGGATCTGTATTCAGGCGCCCTCTTTATCCAGGAGTCTTTGGGTTGGAACCTTTATGTG
TCTGTCATCCTGCTCATTGGCATGACTGCTTTACTGACTGTCACCGGAGGCCTTGTTGCA
GTGATCTACACAGACACCTTACAGGCCCTGCTCATGATTGTTGGGGCCCTCACACTTATG
ATTATAAGCATGATGGAGGTTGGCGGGTTTGAGGAAGTTAAGAGAAGGTACATGTTGGCC
TCACCCAACGTCACGTCCATCTTGTTGACATACAACCTTTCAAACACAAATTCTTGTAAT
GTCCAGCCTAAGAAAGATGCCTTGAAAATGTTGAGGAATCCAACAGATGAAGATGTTCCG
TGGCCTGGATTCATACTTGGACAGACCCCCGCCTCAGTGTGGTATTGGTGTGCTGACCAA
GTCATCGTGCAGAGGGTCCTAGCTGCCAAAAACATTGCTCATGCCAAAGGCTCTACTCTT
ATGGCTGGCTTCTTGAAGCTTCTGCCAATGTTTATCATAGTTGTCCCAGGAATGATTTCC
AGGATACTGTTTGCTGATGATCTAGCTTGCATCAACCCAGAGCACTGCATGCAGGTGTGT
GGAAGCAGAGCCGGGTGCTCTAATATCGCTTACCCACACCTGGTGATGAAGCTGGTTCCT
GTGGGCCTTCGGGGCTTAATGATGGCGGTGATGATTGCAGCTCTCATGAGTGACCTGGAC
TCTATCTTTAACAGTGCCAGTACCATATTCACCCTTGATGTGTACAAACTCATCCGCAAG
AGTGCAAGTTCCCGGGAGCTAATGATTGTGGGGAGGATATTTGTGGCTTTTATGGTGGTT
ATCAGCATAGCATGGGTGCCGATCATCGTGGAGATGCAAGGAGGCCAGATGTACCTTTAC
ATCCAGGAGGTGGCAGATTACCTGACACCTCCGGTGGCAGCCCTGTTCCTTCTGGCAATT
TTCTGGAAGCGCTGCAATGAACAAGGGGCTTTCTACGGAGGAATGGCTGGATTTGTGCTT
GGAGCAGTCCGTTTGATACTGGCTTTTACATACCGTGCCCCGGAATGTGACCAGCCTGAT
GAGAGACCCAGTTTCATCAAAGACATCCATTACATGTATGTGGCCACAGCATTGTTCTGG
ATCACAGGACTCATTACTGTGATTGTTAGCCTCCTCACCCCACCTCCCACGAAGGAGCAG
ATTCGCACCACCACCTTTTGGTCCAAGAAGAACCTGGTGGTGAAGGAGAGCTGCTCTGCC
AGAGAGGAACTGTACAAAATGCAGGAGAAGAGCATGCTGAAGTGCAGTGAGAATAGTGAG
GCCATCAACCACATCATTCCCAATGGGAAATCTGAAGATAGCATCAAAGGCCTTCAGCCA
GAAGACGTCAATCTGTTGGTGACCTGCCGAGAGGAGGCCAACCCAGTGGCATCCGTGGGC
CACTCTGAGGCAGAAACACCAGTAGATGCTTATTCCAATGGGCAAGCAGCTCTCATGGGA
GAGAAAGAGAGAAAGAAGGAAATGGAGGCTGGCAGCCGCTACTGGAAGTTCATAGACTGG
TTTTGCGGCTTTAAGAGTAAGAGTGTCAGCAAGAGGAGTCTCAGAGACCTCATGGAGGAG
GAGGCTGTTTGTTTACAGATGTTAGAGGAGACTCCCAGAGTAAAGCTGATACTCAACGTT
GGACTTTGTGCTGTGTGTTCACTTGGAATTTTCATGTTTGTCTATTTCTCCTTATGA
Parental protein coverage
Changes in the retrocopy sequence
