RetrogeneDB ID:
retro_opri_625
Organism:
Location:
scaffold_19866:44270-44819 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
92.35 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_opri_625
GACGCGGAGGACGCGGTGCACGAGCGAGACGGCTACGATTACGACGGGTACCGTCTCCGG
GTCGAGTTTCCACGGAGCGGCCGCGGGCCGGGCCGAGGCGGAGGTGCAGGTGGATGGGGC
GGAGCGCCCCGCGGCCGCTATGGCCCCCCATCCCGGCGGTCCGACCACCGCGTGGTGGTC
TCCGGACTGCCTCCGAGTGGAAGCTGGCAGGATTTGAAGGATCACATGCGCGAGGCGGGC
GATATATGTTACGCTGATGTCCACCGAGATGGCACCGGTGTCGTGGAGTTTGTACGGAAA
GAAGATATGACCTATGCAGTTCGAAAACTGGACAACACTAAGTTTAGATCTCACGTGGGA
GAAACCGCCTACATCCGGGTGAAGGCTGATGGGCCCAGAAGTCCCAGTTCTGGAAGATCT
CCATCTCGAAGCCGCCGTCGCAGCCGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGT
TACTCCCCAAGGAGAAGCAGAGGATCACCACGCTATTCTCCCCGTCATAGCAGATCTCGC
TCTCGTACA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRK
DAEDAV..RDGYDYDGYRLRVEFPRSGRG.GRGGG.GG.GGAPRGRYGPPSRRS..RVVVSGLPPSGSWQDLKDHMREAGD.CYADV.RDGTGVVEFVRK
Retrocopy
DAEDAVHERDGYDYDGYRLRVEFPRSGRGPGRGGGAGGWGGAPRGRYGPPSRRSDHRVVVSGLPPSGSWQDLKDHMREAGDICYADVHRDGTGVVEFVRK


Parental protein
EDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSRT
EDMTYAVRKLDNTKFRSH.GETAYIRVK.DGPRSPS.GRS.SRSR.RSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSRT
Retrocopy
EDMTYAVRKLDNTKFRSHVGETAYIRVKADGPRSPSSGRSPSRSRRRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSRT


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide