RetrogeneDB ID:
retro_opri_659
Organism:
Location:
scaffold_22445:13278-13620 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.25 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RBM8A
Parental gene aliases:
No gene alias available
Parental gene description:
RNA binding motif protein 8A [Source:HGNC Symbol;Acc:9905]

Genomic region (view in browser)





>retro_opri_659
ATGGCGGACGTCCTGGATCTTCACGAGGCTGGGGGCGAAGATTTCACCATGGATGAGGAT
GGGGACGAGAGCATCCACAAACTGAAAGAAAAAGCCAAGAAGCGGAAGGGCCGCGGCTTT
GGCTCAGAAGAGGGGTCACGGGCACGGATGCGAGAGGATTATGACAGTGTGGAGCAGGAT
GGGGATGAACCCGGACCGCAACGCTCTGTTGAAGGTTGGATTCTCTTTGTTACTGGAGTC
CATGAGGAGGCCACTGAGGAAGACATTCATGACAAATTCGCAGAATATGGAGAAATAAAA
AATATCCAACTCAACCTGGACAGACGTACAGGATACTTGAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIK
MADVLDLHEAGGEDF.MDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIK
Retrocopy
MADVLDLHEAGGEDFTMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIK


Parental protein
NIHLNLDRRTGYLK
NI.LNLDRRTGYLK
Retrocopy
NIQLNLDRRTGYLK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide