RetrogeneDB ID:
retro_opri_675
Organism:
Location:
scaffold_2336:70329-70596 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
52.81 %
Coverage:
53.42 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
ARL2BP
Parental gene aliases:
No gene alias available
Parental gene description:
ADP-ribosylation factor-like 2 binding protein [Source:HGNC Symbol;Acc:17146]

Genomic region (view in browser)





>retro_opri_675
GTTGAGGAACAGCTGGTATACCGGATTCCTGGGTTTAGCATAATGACTGTCACAGCAACA
TTACTGCACTATAAGCATGATCTGCCTGGTGGCATATTTAACATACTCTTGATATTTGTG
GGTTTTCTGGCTTTAAAAGAAATATTTCTGATCTGCAAAGCAGAGAAGGAAAAAGAAGGC
CAGGGACTGAACATCAGCGAGGGTTTAACGGTGACTTCACTGTGTGGGGCATCTCCTATG
TCAACTTTGCAGAACGATCTGCAACAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
IEEQLLERIPGFNMAAFTTTLQHHKDEVAGDIFDMLLTFTDFLAFKEMFLDYRAE---EGRGLDLSSGLVVTSLCKATSLPASQNDLRH
.EEQL..RIPGF.....T.TL.H.K....G.IF..LL.F..FLA.KE.FL...AE...EG.GL..S.GL.VTSLC.A......QNDL.H
Retrocopy
VEEQLVYRIPGFSIMTVTATLLHYKHDLPGGIFNILLIFVGFLALKEIFLICKAEKEKEGQGLNISEGLTVTSLCGASPMSTLQNDLQH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide