RetrogeneDB ID:
retro_opri_716
Organism:
Location:
scaffold_25441:15603-15882 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.92 %
Coverage:
67.39 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
LAMTOR5
Parental gene aliases:
No gene alias available
Parental gene description:
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Genomic region (view in browser)





>retro_opri_716
GAGGGGATGGAGGCGACCTTGGAGCAGCACCTGGAGGACACAATGAAGAATCCATCCGTT
GTTGGAGTCCTGTGCACAGACTCACAAGGACTTAATCTGGGCTGCCGTGGGACGCTGTCA
GATGAGCATGCTGGAGTGATATCTGTTCTAGCCCAGCAAGCAGCTAAGCTTACCTCTGAC
CCCACAGACATTCCTGTGGTGTGTCTAGAATCAGATAACGGGAACATTATGATCCAGAAA
CATGATGGCATTACAGTGGCAGTGCACAAAATGGCCTCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EGMEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS
EGMEATLEQHLEDTMKNPS.VGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS
Retrocopy
EGMEATLEQHLEDTMKNPSVVGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAAKLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide