RetrogeneDB ID:
retro_opri_765
Organism:
Location:
scaffold_2946:146637-146994 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.6 %
Coverage:
53.85 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
AK4
Parental gene aliases:
No gene alias available
Parental gene description:
adenylate kinase 4 [Source:HGNC Symbol;Acc:363]

Genomic region (view in browser)





>retro_opri_765
GACCTGGATCTAGTGATCACTTTGAACATTCCGTTTGAGACATTGAAAGATCAGCTCAGC
CGTCCTTGGATTCACCCTCCCAGCAGAAGAGTGTATAATATGGACTTCAACCCGCCTCAT
GTGCATGGAATTGATGACATCATGGGAGAAGCATTAATCCAACAACAGGAAGATAAGCTT
GAAGCAGTTGCTGCCCAGCTAAGACGGTATAAGGACGCTGCCAAGCCAGTCATTGAGCTA
TACAAGAGCCGAGGAGTGCTCCACCAGTTTTCGGGGACAGAGACTAATAAAATATGGCCT
TATGTTTACACACTTTTCTCAAATAAGATCACACCTATTAAATGCAGACAGGCATTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DLDLVITLNIPFETLKDRLSRRWIHPPSGRVYNMDFNPPHVHGIDDITGEALIQQEEDKPEAVAARLRRYKDTAKPVIELYKSRGVLHQFSGTETNKIWP
DLDLVITLNIPFETLKD.LSR.WIHPPS.RVYNMDFNPPHVHGIDDI.GEALIQQ.EDK.EAVAA.LRRYKD.AKPVIELYKSRGVLHQFSGTETNKIWP
Retrocopy
DLDLVITLNIPFETLKDQLSRPWIHPPSRRVYNMDFNPPHVHGIDDIMGEALIQQQEDKLEAVAAQLRRYKDAAKPVIELYKSRGVLHQFSGTETNKIWP


Parental protein
YVYTLFSNKITPVKRRQAF
YVYTLFSNKITP.K.RQAF
Retrocopy
YVYTLFSNKITPIKCRQAF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide