RetrogeneDB ID:
retro_opri_777
Organism:
Location:
scaffold_3009:108470-108704 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.59 %
Coverage:
57.78 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RSL24D1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:18479]

Genomic region (view in browser)





>retro_opri_777
GTGTTCAGATTCTGTAAATCCAAATGTCATAAAAACTTTAAAAAGAAGCATAATCCTCGC
AAGGTCAGGTGGACCAAAGCATTCCGGAAAGCAGCTGGCAAGGAACTGACAGTGGATAAT
TCATTTGAATTTGAAAAACGAAGACATGAACCTATCAAATACCAGAGAGAGTTGTGGAAT
AAAACTATTGATGTAATGAAGAGAGTTGAAGAGATAAAGCAGAAACGCAGGGCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQA
VFRFCKSKCHKNFKKK.NPRKVRWTKAFRKAAGKELTVDNSFEFEKRR.EP.KYQRELWNKTID.MKRVEEIKQKR.A
Retrocopy
VFRFCKSKCHKNFKKKHNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRHEPIKYQRELWNKTIDVMKRVEEIKQKRRA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide