RetrogeneDB ID:
retro_opri_827
Organism:
Pika ( Ochotona_princeps )
Location:
scaffold_3486:117314-118925 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
68.77 %
Coverage:
72.59 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
PAPOLG
Parental gene aliases:
No gene alias available
Parental gene description:
poly(A) polymerase gamma [Source:HGNC Symbol;Acc:14982]
Genomic region (view in browser)
>retro_opri_827
AAGCGCTACGGCATCTCCTCGCCCATCAGCCTGGCCACCCCCAAGGAGACGGACTGCGCG
CTCACCCAGAAGCTCATCGAGACCCTGCGGCCCTTCGGCGTGTTCGAGGAGGAGGAGGAG
CTGCAGGGCCGGAGCCTGATCCTGGAGAAGTTGAACAAGTTGGTGAAGGAGTGGATCCGC
GAAGTCAGTGCGAGCAAGAGCCTGCCCGAGGTGCTGGTGGAGAGCGTGGGCGGCCGGCTC
TTCACCTTCGGCTCCTACCGCCTGGGCGTGCACACCAAGGGCGCCGACATCGACGCGCTG
TGCGTGGCGCCCAGGCACGTGGACCGCAGCGACTTCTTCACCTCCTTCTACGACAAGCTG
AAGCTGCAGGAGGAGGTGAAGGACCTGCGGGCCGTGGAGGAGGCGTTCGTGCCGGTCATA
AAGCTGTGTTTTGATGGGGTAGAGATCGACATTTTGTTTGCAAGGTTGGCGCTGCAGACC
ATTCCAGAAGACTTGGATTTGAGGGATGACAGTTTGCTCAAGAACTTAGATATCAGATGC
ATCAGGAGTCTTAACGGTTGCCGGGTAACCGATGAGATATTACACCTGGTCCCAGACATG
GACAACTTCAGGTTAACGCTGAGAGCTATCAAGCTGTGGGCCAAGTGCCACAATATCTAC
TCCAACATACTCGGCTTCCTGGGCGGCGTTTCCTGGGCCATGCTGGTGGCGAGAACCTGC
CAGCTCTACCCGAATGCGGTAGCCTCCACTCTGGTGCGTAAATTTTTCTTGGTGTTTTCG
GAATGGGAGTGGCCCAACCCGGTGCTGCTCAAAGAGCCGGAGGAGCGGAACCTGAACCTG
CCGGTCTGGGACCCGAGAGTGAACCCCAGTGACCGCTACCACCTGATGCCGATCATCACC
CCGGCATACCCGCAGCAGAACTCCACCTACAACGTGTCCGTCTCCACCAGGAGGGTCATG
GTGGAGGAGTTTAAACAAGGCCTCGCCATCACACACGAGATCCTGCTCAACAAGGCAGAG
TGGTCTAAACTTTTTGAAGCTCCAAGCTTCTTCCAGAAGTACAAGCACTACATCGTTCTT
ATAGCAAGTGCGCCGACGGAGAAGCAGCATCTGGAGTGGGTCGGCCTGGTGGAGTCCAAG
ATCCGGATCCTAGTCGGGAGCCTGGAGAAGAATGAGTTCATCACCCTGGCGCACGTGAAC
CCCCAGTCGTACCCGGCACCCAAAGAGAAGCCCAAGCAGGAGGAGTTCTGCACCATGTGG
GTGATCGGGCTGGTGCTGAAGAGGCCCGAGAACTCCGAGGTGCTCAGCGTGGACCTCACC
TACGACATCCAGTCGTTCACTGACACCGTGTATCGGCAGGCCATCAACAGCAAGATGTTT
GAGATGGATATGAAAGTTGCTGCCATGCATTTGAGAAAGAAAGAGCTCCAGGAGCTGCTC
CCGAACCACGTATTTCAGAAAAAGAAGACCCACCCGGCAGAGGGCGTCACCCTGACAGCC
ACGAGTGATGATGGCAGTGTCGGGACAGACAGCGAAGACAGCGTGTCCACACCCTTGCCC
CCTGGCCTCTTGACTGGCAGCTCCCAGGACACCAGCAGCCCCGCCCCACCC
Parental protein coverage
Changes in the retrocopy sequence
