RetrogeneDB ID:
retro_opri_870
Organism:
Location:
scaffold_39285:736-970 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
92.31 %
Coverage:
84.78 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL37A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L37a [Source:HGNC Symbol;Acc:10348]

Genomic region (view in browser)





>retro_opri_870
GGGACCCACTACGGCGCCTCCCTCCGGAAGATGGTGAAGAAGATTGAAATTAGCCAGCAC
GCCAAGTACACCTGCTCCTTCTGCAGCAAAAGAAAGATGAAGAGGCGCGCCGTGGGCATC
TGGCACTGTGGCTCCTGCATGAAGACGGTGGCCAGGGGCGCCTGGACCTACAACACCACT
TCCGCAGTCACAGTTAAGTCTGCCATCAGAGGACTGAAGGAATTGAAAGCCCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ
GT.YGASLRKMVKKIEISQHAKYTCSFC.K.KMKRRAVGIWHCGSCMKTVA.GAWTYNTTSAVTVKSAIR.LKELK.Q
Retrocopy
GTHYGASLRKMVKKIEISQHAKYTCSFCSKRKMKRRAVGIWHCGSCMKTVARGAWTYNTTSAVTVKSAIRGLKELKAQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide