RetrogeneDB ID:
retro_opri_962
Organism:
Location:
scaffold_5053:54-414 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
100.0 %
Coverage:
65.22 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
GNPNAT1
Parental gene aliases:
No gene alias available
Parental gene description:
glucosamine-phosphate N-acetyltransferase 1 [Source:HGNC Symbol;Acc:19980]

Genomic region (view in browser)





>retro_opri_962
ATGAAACCTGATGAGACGCCGATGTTTGATCCTAGTCTGCTCAGGGAGGTGGACTGGAGC
CAGAACACGGCTACGTTTTCTCCAGCCATCTCGCCCACGCATCCTGGAGAAGGCTTGGTG
TTGAGGCCTCTTTGCACTGCTGACTTAAATAGAGGGTTTTTTAAGGTACTGGGCCAGCTG
ACAGAGACTGGAGTTATCAACCCGGAACAGTTTATGAAATCTTTTGAGCATATGAAGAAA
TCTGGGGATTATTACGTTACAGTTGTAGAAGATGTGACACTAGGACAGATTGTTGCTACG
GCAACCCTGATAATAGAACATAAATTCATCCATTCCTGTGCTAAGAGAGGAAGAGTGGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MKPDETPMFDPSLLREVDWSQNTATFSPAISPTHPGEGLVLRPLCTADLNRGFFKVLGQLTETGVINPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVAT
MKPDETPMFDPSLLREVDWSQNTATFSPAISPTHPGEGLVLRPLCTADLNRGFFKVLGQLTETGVINPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVAT
Retrocopy
MKPDETPMFDPSLLREVDWSQNTATFSPAISPTHPGEGLVLRPLCTADLNRGFFKVLGQLTETGVINPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVAT


Parental protein
ATLIIEHKFIHSCAKRGRVE
ATLIIEHKFIHSCAKRGRVE
Retrocopy
ATLIIEHKFIHSCAKRGRVE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide