RetrogeneDB ID:
retro_opri_978
Organism:
Pika ( Ochotona_princeps )
Location:
scaffold_5212:119628-121128 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
92.42 %
Coverage:
87.13 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
RNGTT
Parental gene aliases:
No gene alias available
Parental gene description:
RNA guanylyltransferase and 5'-phosphatase [Source:HGNC Symbol;Acc:10073]
Genomic region (view in browser)
>retro_opri_978
TGCCCGACAACCGAGGTCACCAATACATTTATTCGTCTGTGTGAGCGATTTCACGACAGA
ACGCCACCCGAACTGATCGGTGTTCATTGTACCCATGGTTTCAATCGTACTGGCTTCCTC
ATTTGTGCCTTTTTGGTGGAGAACATGGATTGGAGCATTGAAGCAGCAGTTGCTACTTTT
GCCCAAGCCAGACCACCAGGAATCTATAAGGGCGATTATTTGAAGGAACTCTTTTGGCGC
TATGGCGCTAGAGAAGCACCACCCCCACCTCTCTTGCCAGATTGGTGTTTGGAGGATGAG
CAAGATGAAGGTGAGGAAGAGGATGGAAACAAGGAATCAGAACCCAGATCAAGTGCTTCC
TTTGGCAAAAGGAGGAAAGAAAGGTTGAAAGTGGGTGCCATTTTCTTGGAAGGTATAACT
GTGAACGGTGTGACTCAAGTAACAACTCAACCAAAGCTAGGAGAGGTACAACAGAAGTGT
CATCAATTCTGTGGCTGGGAAGGGTCTGGATTCCCTGGAGCACAGCCCGTTTCCATGGAC
AAGCAAAATATTACACTTTTAGAGCAGAAGCCATATAAAGTAAGCTGGAAAGCAGATGGC
ACTCGTTACATGATGTTGGTTGATGGCACAAATGAAGTCTTTATGATTGATCGAGATAAT
TCAGTGTTTCATGTTTCTAATCTGGAATTTCCATGTCGGAAAGACCTTCAAATCCATTTA
TCGAATACTCTTTTGGATGGCGAGATGATTATTGACAGAGTAAACGGACAGGCTCTTCCT
AGATATTTGATATATGACATCATTAAATTCAATGCACAGCCAGTTGGAGATTGCGACTTG
AATGTCCGCTTGCAGTGTATAGAACGAGAAATTATAAATCCTCGGCACGAGAAAATGAAG
ACCGGACTCATTGACAAGACACGGGAACCATTTAGTGTCAGAAAGAAGCCGTTTTTTGAC
ATTCATACTTCAAGAAAGCTGCTTGAAGGAAATTTTGCCAAACAAGTCAGTCATGCAGTG
GATGGACTTATATTTCAGCCCATCGGGAAGTATAAGCCTGGTCGGTGTGATGATATTTTG
AAGTGGAAACCTCCCAGTTTGAATTCTGTGGATTTCCGCCTGAAGATAACAAGACTGGGA
GGAGAAGGGCTACTTCCTCAGAATGCCGGTCTTCTCTATGTTGGAGGCTACGAAAGACCC
TTTGCCCAAATCAAGGTGACAAAAGAGCTCAATCAGTATGACAACAAAATCATAGAATGC
AGATTTGAGAAGAACAGCTGGGTCTTCATGAGACCGAGAACAGACAAAAGTTTTCCGAAT
GCCTATAACACTGCCATGGCTGTGTGCAATAGCATCTCAAACCCTGTCACCAAGGAGATG
CTGTTTGAGTTCATCGACGGATGTGCTGCAGCTTTTCAAGGACAGAAGCAAAAGCATCAT
CTGAGCCCCGACACAGAGCTCATGCCCCTGCCGCCTCCCAAAAGACCGCGCCCTGCCACC
Parental protein coverage
Changes in the retrocopy sequence
