RetrogeneDB ID:
retro_opri_987
Organism:
Location:
scaffold_5297:73398-73674 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
80.21 %
Coverage:
60.76 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL19
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L19 [Source:HGNC Symbol;Acc:10312]

Genomic region (view in browser)





>retro_opri_987
CAGCAGATTAGGAATCTGATTAAGGATGGGCTGATTATCCACAAACCAGTGACCGTCCAC
TCCCGGGCTCAGTGCCAGAAGAACACCCTGACCCGCAGAAAAGGCAGGCACATGGGCATA
GAGAAGCATAAGGCTACAGCCAAAGCGCGCATGCTGGAAAAGGTGACCTGGATGAGGAGG
ATGCGGATCCTGCGCCGCCTGCTCAGGAGATACCAGGAGTCCAAGAAGATTGACCGCCAC
AGGTACCAGAAGGTGAAGGGAAGCATGTTCAAAAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKN
QQIR.LIKDGLII.KPVTVHSRA.C.KNTL.RRKGRHMGI.K.K.TA.ARM.EKVTWMRRMRILRRLLRRY.ESKKIDRH.Y.....KVKG..FKN
Retrocopy
QQIRNLIKDGLIIHKPVTVHSRAQCQKNTLTRRKGRHMGIEKHKATAKARMLEKVTWMRRMRILRRLLRRYQESKKIDRHRYQ----KVKGSMFKN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide