RetrogeneDB ID:
retro_trub_18
Organism:
Fugu ( Takifugu_rubripes )
Location:
scaffold_527:78265-79327 (+)
Status:
KNOWN_PROTEIN_CODING
Ensembl ID:
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary
Identity:
74.5 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0
Parental gene:
Parental gene symbol:
TRU.1921
Parental gene aliases:
No gene alias available
Parental gene description:
rod-like opsin [Source:RefSeq peptide;Acc:NP_001029021]
Genomic region (view in browser)
>retro_trub_18
ATGAACGGCACGGAGGGACCATTTTTCTATGTCCCCATGGTAAACACCACCGGCGTCGTC
CGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTG
GGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTAT
GTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCA
GTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCAC
GGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGA
GGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGC
AAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACC
TGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCT
GAGGGCATGCAGTGTTCATGCGGAGTCGACTACTACACCCGTGCAGAGGGATTCAATAAC
GAGTCCTTTGTTATCTACATGTTCGTCTGCCACTTCCTCATTCCACTGATAATCATCTTC
TTCTGCTACGGCCGTCTGCTCTGCGCCGTCAAGGAGGCCGCTGCTGCCCAGCAAGAGTCC
GAGACCACCCAGAGGGCTGAGAGGGAGGTCACCCGCATGGTCATTCTCATGGTCATTTCC
TTCCTGGTATGTTGGTTACCATATGCTGGTGTGGCCTGGTACATCTTCACACATCAGGGC
TCTGAGTTTGGACCCGTCTTCATGACCATCCCGGCCTTCTTTGCCAAGAGCTCCTCCATC
TACAACCCGATGATCTACATCTGCATGAACAAGCAGTTCCGCCACTGCATGATCACCACC
TTGTGCTGCGGGAAGAACCCCTTCGAGGAGGAAGAGGGCGCGTCCACTACTTCCAAGACC
GAGGCCTCTTCCGTCTCCTCGAGTTCTGTGTCTCCTGCGTAA
Parental protein coverage
Changes in the retrocopy sequence
