RetrogeneDB ID:
retro_trub_19
Organism:
Location:
scaffold_94:802754-803345 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
80.0 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
rhoab
Parental gene aliases:
No gene alias available
Parental gene description:
ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]

Genomic region (view in browser)





>retro_trub_19
ATGGCTGACATACGCAAGAAACTTGTGGTGGTGGGGGACGGCGCATGTGGGAAGACGTGT
CTGCTGATCGTGTTCAGCAAAGACGAGTTTCCCGAGGTGTACGTGCCGACGGTTTTCGAG
ACGTATGTGGCGGACATCGAGGTGGAGAACAAGCAGGTCCAGCTGGCTTTGTGGGACACG
GCCGGGCAGGAGGACTACGACCGGCTGCGGCCGCTCTCCTACCCGGACACCGACGTCATC
CTCATGTGCTTCTCCGTGGACAGTCCGGATTCTCTGGAGAACATCCCCGAAAAGTGGGTC
CCCGAAGTCAAACACTTCTGCCCGAACGTCCCCATCATCCTGGTGGCCAACAAGAAGGAC
CTCCGGAACGACGAGAACGTGAAGAACGAGTTGTCTCGTCTGAAGCTGGAGCCGGTGCGG
GCGGAAGATGGCCGGGCCATGGCCATGCGCATCGGCGCCTATGACTATCTGGAGTGCTCG
GCCAAAACTAAGGAAGGTGTCTGGGAGGTGTTCGAAACCGCGACGCGGGCAGCTCTGCAG
AAGCGAAAGACGCCATCGGAAGGCTGTCACAAATGCTGTGTTTTGATGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT
MA.IRKKLV.VGDGACGKTCLLIVFSKD.FPEVYVPTVFE.YVADIEV..KQV.LALWDTAGQEDYDRLRPLSYPDTDVILMCFS.DSPDSLENIPEKW.
Retrocopy
MADIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFETYVADIEVENKQVQLALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWV


Parental protein
PEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEDGRDMANRISAFGYMECSAKTKDGVREVFEMATRAALQARR--GKKSSKCAVL
PEVKHFCPNVPIILV.NKKDLRNDE....EL...K.EPV..EDGR.MA.RI.A..Y.ECSAKTK.GV.EVFE.ATRAALQ.R........KC.VL
Retrocopy
PEVKHFCPNVPIILVANKKDLRNDENVKNELSRLKLEPVRAEDGRAMAMRIGAYDYLECSAKTKEGVWEVFETATRAALQKRKTPSEGCHKCCVL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide